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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs9323441 chr14:64395689 T/C SYNE2 chr14:64319701-64693151:+ 1.01 5.25 2.85E-6 Box Plot
ACC rs9326892 chr5:112882338 G/T APC chr5:112043195-112181936:+ 0.88 5.11 4.61E-6 Box Plot
ACC rs9342041 chr6:86280875 G/A SNHG5 chr6:86370668-86388454:- 0.67 5.97 2.11E-7 Box Plot
ACC rs9342044 chr6:86414030 C/T SNHG5 chr6:86370668-86388454:- 0.62 5.44 1.45E-6 Box Plot
ACC rs9342051 chr6:86699910 G/A SNHG5 chr6:86370668-86388454:- 0.61 5.24 2.92E-6 Box Plot
ACC rs9344532 chr6:86234070 A/G SNHG5 chr6:86370668-86388454:- 0.68 5.26 2.73E-6 Box Plot
ACC rs9344533 chr6:86236188 C/A SNHG5 chr6:86370668-86388454:- 0.67 5.97 2.11E-7 Box Plot
ACC rs9344542 chr6:86393905 C/T SNHG5 chr6:86370668-86388454:- 0.7 6.19 9.58E-8 Box Plot
ACC rs9353318 chr6:86231721 T/A SNHG5 chr6:86370668-86388454:- 0.68 5.09 4.95E-6 Box Plot
ACC rs9353320 chr6:86244848 C/G SNHG5 chr6:86370668-86388454:- 0.67 5.97 2.11E-7 Box Plot
ACC rs9359658 chr6:86305769 C/T SNHG5 chr6:86370668-86388454:- 0.65 5.46 1.37E-6 Box Plot
ACC rs941334 chr2:132187885 A/G LOC150776 chr2:132250386-132279149:+ 0.52 6.43 4.07E-8 Box Plot
ACC rs9444351 chr6:86247799 T/C SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot
ACC rs9444352 chr6:86257535 G/T SNHG5 chr6:86370668-86388454:- 0.73 8.03 1.12E-10 Box Plot
ACC rs9444354 chr6:86291935 G/A SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot